Survival-associated eQTLs across different cancer types
We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.
|
Cancer type
|
SNP ID
|
SNP position (hg19)
|
Alleles (A/a)
|
log-rank test p-value
|
Sample size
|
Median survival time AA
|
Median survival time Aa
|
Median survival time aa
|
|
|---|---|---|---|---|---|---|---|---|---|
| KIRP | rs7176215 | chr15:27029135 | A/G | 0.000146 | 214 | 10.83 | 20.27 | 15.1 | KM Plot |
| KIRP | rs7177285 | chr15:43077944 | T/G | 3.4E-5 | 208 | 8.73 | 15.1 | 16.43 | KM Plot |
| KIRP | rs71804340 | chr22:18093016 | ATAAC/A | 4.24E-5 | 214 | 16.43 | 20.27 | 10.55 | KM Plot |
| KIRP | rs7185527 | chr16:650708 | C/T | 6.6E-5 | 213 | 16.73 | 14.7 | 6.57 | KM Plot |
| KIRP | rs7189914 | chr16:642222 | C/T | 6.98E-5 | 208 | 16.93 | 15.65 | 6.57 | KM Plot |
| KIRP | rs7190358 | chr16:650788 | C/T | 6.08E-5 | 214 | 16.73 | 14.87 | 6.57 | KM Plot |
| KIRP | rs7191421 | chr16:19852814 | A/C | 6.91E-6 | 214 | 18.23 | 15.75 | 15.08 | KM Plot |
| KIRP | rs7191458 | chr16:4511752 | T/C | 6.83E-6 | 212 | 16.43 | 19.27 | 9.92 | KM Plot |
| KIRP | rs7192051 | chr16:4542117 | A/C | 3.27E-6 | 214 | 16.53 | 12.1 | 9.92 | KM Plot |
| KIRP | rs71940731 | chr10:102022169 | ACATT/A | 6.35E-6 | 213 | 16.43 | 22.77 | 3.6 | KM Plot |
| KIRP | rs7194436 | chr16:4539832 | G/C | 3.38E-6 | 214 | 16.45 | 12.63 | 10.83 | KM Plot |
| KIRP | rs7195074 | chr16:47694821 | G/T | 2.25E-6 | 213 | 17.17 | 12.9 | 9 | KM Plot |
| KIRP | rs7195782 | chr16:4539861 | C/T | 3.74E-6 | 213 | 16.43 | 12.63 | 10.83 | KM Plot |
| KIRP | rs7196244 | chr16:47577668 | A/G | 7.93E-8 | 214 | 17.6 | 12.32 | 12.85 | KM Plot |
| KIRP | rs7198207 | chr16:648515 | T/C | 7.07E-5 | 212 | 16.73 | 14.53 | 6.57 | KM Plot |